HL_7UVZ_080

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7UVZ|1|a|U|463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2243

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UVZ|1|a|G|458
7UVZ|1|a|U|459
7UVZ|1|a|U|460
7UVZ|1|a|A|461
7UVZ|1|a|A|462
7UVZ|1|a|U|463
7UVZ|1|a|A|464
7UVZ|1|a|C|465
7UVZ|1|a|C|466

Current chains

Chain a

16s Ribosomal RNA

Nearby chains