HL_7UVZ_088

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_088 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.0675

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7UVZ|1|a|C|894
7UVZ|1|a|G|895
7UVZ|1|a|C|896
7UVZ|1|a|A|897
7UVZ|1|a|A|898
7UVZ|1|a|G|899

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA