HL_7UVZ_095

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUGACAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_095 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.3245

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UVZ|1|a|G|1161
7UVZ|1|a|U|1162
7UVZ|1|a|G|1163
7UVZ|1|a|A|1164
7UVZ|1|a|C|1165
7UVZ|1|a|A|1166
7UVZ|1|a|A|1167
7UVZ|1|a|A|1168
7UVZ|1|a|C|1169

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2