HL_7UW1_009

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUGGGAAG

Length

8 nucleotides

Bulged bases

7UW1|1|A|A|313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_009 not in the Motif Atlas

Homologous match to HL_5J7L_142

Geometric discrepancy: 0.1074

The information below is about HL_5J7L_142

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

7UW1|1|A|C|307
7UW1|1|A|U|308
7UW1|1|A|G|309
7UW1|1|A|G|310
7UW1|1|A|G|311
7UW1|1|A|A|312
7UW1|1|A|A|313
7UW1|1|A|G|314

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L24