HL_7UW1_016

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUUCGUG

Length

7 nucleotides

Bulged bases

7UW1|1|A|U|544, 7UW1|1|A|U|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_016 not in the Motif Atlas

Geometric match to HL_4V9F_005

Geometric discrepancy: 0.1998

The information below is about HL_4V9F_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

7UW1|1|A|C|542
7UW1|1|A|U|543
7UW1|1|A|U|544
7UW1|1|A|C|545
7UW1|1|A|G|546
7UW1|1|A|U|547
7UW1|1|A|G|548

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L13

Chain Q

50S ribosomal protein L21