HL_7UW1_076

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GACUGAGACACGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_076 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0806

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UW1|1|a|G|316
7UW1|1|a|A|317
7UW1|1|a|C|318
7UW1|1|a|U|319
7UW1|1|a|G|320
7UW1|1|a|A|321
7UW1|1|a|G|322
7UW1|1|a|A|323
7UW1|1|a|C|324
7UW1|1|a|A|325
7UW1|1|a|C|326
7UW1|1|a|G|327
7UW1|1|a|G|328
7UW1|1|a|C|329

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20