HL_7UW1_080

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7UW1|1|a|U|463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1964

The information below is about HL_5J7L_012

Detailed Annotation

GNRA with extra near cWW

Broad Annotation

GNRA with extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UW1|1|a|G|458
7UW1|1|a|U|459
7UW1|1|a|U|460
7UW1|1|a|A|461
7UW1|1|a|A|462
7UW1|1|a|U|463
7UW1|1|a|A|464
7UW1|1|a|C|465
7UW1|1|a|C|466

Current chains

Chain a

16s Ribosomal RNA

Nearby chains