HL_7V2L_031

3D structure

PDB id

7V2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K1k2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7V2L_031 not in the Motif Atlas

Geometric match to HL_6CU1_002

Geometric discrepancy: 0.1036

The information below is about HL_6CU1_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7V2L|1|A|C|1493
7V2L|1|A|G|1494
7V2L|1|A|G|1495
7V2L|1|A|A|1496
7V2L|1|A|A|1497
7V2L|1|A|G|1498

Current chains

Chain A

16s ribosomal RNA

Nearby chains