HL_7V2N_022

3D structure

PDB id

7V2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCA

Length

53 nucleotides

Bulged bases

7V2N|1|A|A|979, 7V2N|1|A|G|1015

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7V2N|1|A|U|975
7V2N|1|A|G|976
7V2N|1|A|C|977
7V2N|1|A|U|978
7V2N|1|A|A|979
7V2N|1|A|G|980
7V2N|1|A|G|981
7V2N|1|A|G|982
7V2N|1|A|A|983
7V2N|1|A|A|984
7V2N|1|A|C|985
7V2N|1|A|C|986
7V2N|1|A|C|987
7V2N|1|A|G|988
7V2N|1|A|G|989
7V2N|1|A|G|990
7V2N|1|A|U|991
7V2N|1|A|G|992
7V2N|1|A|A|993
7V2N|1|A|A|994
7V2N|1|A|A|995
7V2N|1|A|G|996
7V2N|1|A|C|997
7V2N|1|A|C|998
7V2N|1|A|U|999
7V2N|1|A|G|1000
7V2N|1|A|G|1001
7V2N|1|A|G|1002
7V2N|1|A|G|1003
7V2N|1|A|U|1004
7V2N|1|A|G|1005
7V2N|1|A|C|1006
7V2N|1|A|C|1007
7V2N|1|A|C|1008
7V2N|1|A|C|1009
7V2N|1|A|G|1010
7V2N|1|A|C|1011
7V2N|1|A|G|1012
7V2N|1|A|A|1013
7V2N|1|A|G|1014
7V2N|1|A|G|1015
7V2N|1|A|G|1016
7V2N|1|A|G|1017
7V2N|1|A|A|1018
7V2N|1|A|G|1019
7V2N|1|A|C|1020
7V2N|1|A|C|1021
7V2N|1|A|C|1022
7V2N|1|A|U|1023
7V2N|1|A|A|1024
7V2N|1|A|G|1025
7V2N|1|A|C|1026
7V2N|1|A|A|1027

Current chains

Chain A

16s ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14 type Z

Chain S

30S ribosomal protein S19