HL_7V2O_021
3D structure
- PDB id
- 7V2O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 7V2O|1|A|G|949
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7V2O_021 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1363
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.3
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7V2O|1|A|C|940
7V2O|1|A|G|941
7V2O|1|A|A|942
7V2O|1|A|A|943
7V2O|1|A|G|944
7V2O|1|A|C|945
7V2O|1|A|A|946
7V2O|1|A|A|947
7V2O|1|A|C|948
7V2O|1|A|G|949
7V2O|1|A|C|950
7V2O|1|A|G|951
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14 type Z
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