HL_7V2Q_005

3D structure

PDB id

7V2Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K6

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

7V2Q|1|A|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7V2Q_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.2746

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7V2Q|1|A|C|208
7V2Q|1|A|U|209
7V2Q|1|A|U|210
7V2Q|1|A|U|211
7V2Q|1|A|G|212

Current chains

Chain A

16s ribosomal RNA

Nearby chains