HL_7V2Q_033

3D structure

PDB id

7V2Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K6

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7V2Q_033 not in the Motif Atlas

Homologous match to HL_4LFB_023

Geometric discrepancy: 0.4298

The information below is about HL_4LFB_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39005.1

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

275

Unit IDs

7V2Q|1|A|C|1009
7V2Q|1|A|G|1010
7V2Q|1|A|C|1011
7V2Q|1|A|G|1012
7V2Q|1|A|A|1013
7V2Q|1|A|G|1014

Current chains

Chain A

16s ribosomal RNA

Nearby chains