HL_7VNV_008
3D structure
- PDB id
- 7VNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of tRNAVal from Sulfolobus Tokodaii
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.9 Å
Loop
- Sequence
- (PSU)A(7SN)C(OMC)UGGUUAG
- Length
- 12 nucleotides
- Bulged bases
- 7VNV|1|B|G|18, 7VNV|1|B|G|19, 7VNV|1|B|U|20, 7VNV|1|B|U|20|||a
- QA status
- Modified nucleotides: PSU, 7SN, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7VNV_008 not in the Motif Atlas
- Homologous match to HL_4YYE_001
- Geometric discrepancy: 0.3735
- The information below is about HL_4YYE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7VNV|1|B|PSU|13
7VNV|1|B|A|14
7VNV|1|B|7SN|15
7VNV|1|B|C|16
7VNV|1|B|OMC|17
7VNV|1|B|U|17|||a
7VNV|1|B|G|18
7VNV|1|B|G|19
7VNV|1|B|U|20
7VNV|1|B|U|20|||a
7VNV|1|B|A|21
7VNV|1|B|G|22
Current chains
- Chain B
- RNA (78-MER)
Nearby chains
- Chain A
- Transfer RNA; tRNA
Coloring options: