HL_7VYX_003

3D structure

PDB id

7VYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the selenomethionine(SeMet)-derived Cas12c1 (D969A) ternary complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CAG

Length

3 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7VYX_003 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2317

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7VYX|1|C|C|88
7VYX|1|C|A|89
7VYX|1|C|G|98

Current chains

Chain C

sgRNA

Nearby chains