HL_7WTL_027
3D structure
- PDB id
- 7WTL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUGAUCCUG
- Length
- 9 nucleotides
- Bulged bases
- 7WTL|1|C2|U|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7WTL_027 not in the Motif Atlas
- Geometric match to HL_5J7L_146
- Geometric discrepancy: 0.3789
- The information below is about HL_5J7L_146
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_30680.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7WTL|1|C2|U|8
7WTL|1|C2|U|9
7WTL|1|C2|G|10
7WTL|1|C2|A|11
7WTL|1|C2|U|12
7WTL|1|C2|C|13
7WTL|1|C2|C|14
7WTL|1|C2|U|15
7WTL|1|C2|G|16
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23-A
Coloring options: