HL_7WTS_013

3D structure

PDB id

7WTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGCCAAUUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTS|1|2|G|611
7WTS|1|2|U|612
7WTS|1|2|G|613
7WTS|1|2|C|614
7WTS|1|2|C|615
7WTS|1|2|A|628
7WTS|1|2|A|629
7WTS|1|2|U|630
7WTS|1|2|U|631
7WTS|1|2|C|632

Current chains

Chain 2

18S rRNA

Nearby chains

Chain X

40S ribosomal protein S23

Chain q

Probable 18S rRNA (guanine-N(7))-methyltransferase

Chain u

Pre-rRNA-processing protein TSR1 homolog