HL_7WTT_013

3D structure

PDB id

7WTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGCCAAUUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTT|1|2|G|611
7WTT|1|2|U|612
7WTT|1|2|G|613
7WTT|1|2|C|614
7WTT|1|2|C|615
7WTT|1|2|A|628
7WTT|1|2|A|629
7WTT|1|2|U|630
7WTT|1|2|U|631
7WTT|1|2|C|632

Current chains

Chain 2

18S rRNA

Nearby chains

Chain X

40S ribosomal protein S23

Chain q

Probable 18S rRNA (guanine-N(7))-methyltransferase

Chain u

Pre-rRNA-processing protein TSR1 homolog