HL_7WTW_024

3D structure

PDB id

7WTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

7WTW|1|2|U|1371

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTW_024 not in the Motif Atlas

Geometric match to HL_3R4F_001

Geometric discrepancy: 0.2544

The information below is about HL_3R4F_001

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

7WTW|1|2|G|1366
7WTW|1|2|U|1367
7WTW|1|2|U|1368
7WTW|1|2|A|1369
7WTW|1|2|A|1370
7WTW|1|2|U|1371
7WTW|1|2|U|1372
7WTW|1|2|C|1373

Current chains

Chain 2

18S rRNA

Nearby chains

Chain K

RRP12-like protein