HL_7WTX_024
3D structure
- PDB id
- 7WTX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUGAUAGCU
- Length
- 10 nucleotides
- Bulged bases
- 7WTX|1|2|U|1300, 7WTX|1|2|G|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7WTX_024 not in the Motif Atlas
- Geometric match to HL_5U3G_001
- Geometric discrepancy: 0.2034
- The information below is about HL_5U3G_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7WTX|1|2|A|1295
7WTX|1|2|U|1296
7WTX|1|2|U|1297
7WTX|1|2|G|1298
7WTX|1|2|A|1299
7WTX|1|2|U|1300
7WTX|1|2|A|1301
7WTX|1|2|G|1302
7WTX|1|2|C|1303
7WTX|1|2|U|1304
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain P
- 40S ribosomal protein S15
- Chain f
- Ubiquitin-40S ribosomal protein S27a
- Chain t
- Protein LTV1 homolog
- Chain w
- Bystin
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