HL_7WTZ_029

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTZ_029 not in the Motif Atlas

Geometric match to HL_4YAZ_003

Geometric discrepancy: 0.1859

The information below is about HL_4YAZ_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7WTZ|1|2|C|1565
7WTZ|1|2|G|1566
7WTZ|1|2|G|1567
7WTZ|1|2|C|1568
7WTZ|1|2|A|1569
7WTZ|1|2|G|1570

Current chains

Chain 2

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S18

Chain T

40S ribosomal protein S19