HL_7WTZ_031

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

7WTZ|1|2|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTZ_031 not in the Motif Atlas

Homologous match to HL_8P9A_223

Geometric discrepancy: 0.5593

The information below is about HL_8P9A_223

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTZ|1|2|G|1658
7WTZ|1|2|U|1659
7WTZ|1|2|C|1660
7WTZ|1|2|A|1661
7WTZ|1|2|U|1662
7WTZ|1|2|A|1663
7WTZ|1|2|A|1664
7WTZ|1|2|G|1665
7WTZ|1|2|C|1666

Current chains

Chain 2

18S rRNA

Nearby chains

Chain T

40S ribosomal protein S19