HL_7XAM_003

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7XAM|1|A|A|122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7XAM_003 not in the Motif Atlas

Homologous match to HL_7RQB_003

Geometric discrepancy: 0.1446

The information below is about HL_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

7XAM|1|A|G|120
7XAM|1|A|G|121
7XAM|1|A|A|122
7XAM|1|A|A|123
7XAM|1|A|A|124
7XAM|1|A|C|125

Current chains

Chain A

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L34