HL_7XAM_009

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

7XAM|1|A|U|285, 7XAM|1|A|U|288, 7XAM|1|A|C|291, 7XAM|1|A|U|302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XAM|1|A|U|283
7XAM|1|A|G|284
7XAM|1|A|U|285
7XAM|1|A|G|286
7XAM|1|A|A|287
7XAM|1|A|U|288
7XAM|1|A|A|289
7XAM|1|A|C|290
7XAM|1|A|C|291
7XAM|1|A|G|292
7XAM|1|A|G|293
7XAM|1|A|G|294
7XAM|1|A|U|295
7XAM|1|A|A|296
7XAM|1|A|G|297
7XAM|1|A|G|298
7XAM|1|A|G|299
7XAM|1|A|G|300
7XAM|1|A|U|301
7XAM|1|A|U|302
7XAM|1|A|G|303

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9