HL_7XNX_080

3D structure

PDB id

7XNX (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

7XNX|1|L1|C|5023

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XNX|1|L1|C|5021
7XNX|1|L1|U|5022
7XNX|1|L1|C|5023
7XNX|1|L1|C|5024
7XNX|1|L1|C|5025
7XNX|1|L1|U|5026
7XNX|1|L1|C|5027
7XNX|1|L1|G|5028

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L22

Chain SI

40S ribosomal protein S8