HL_7XNX_101
3D structure
- PDB id
- 7XNX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UCUCGGCGGGGCCCGAA
- Length
- 17 nucleotides
- Bulged bases
- 7XNX|1|S2|G|786, 7XNX|1|S2|G|787, 7XNX|1|S2|G|788, 7XNX|1|S2|C|792
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7XNX|1|S2|U|747
7XNX|1|S2|C|748
7XNX|1|S2|U|749
7XNX|1|S2|C|750
7XNX|1|S2|G|751
7XNX|1|S2|G|752
7XNX|1|S2|C|753
7XNX|1|S2|G|786
7XNX|1|S2|G|787
7XNX|1|S2|G|788
7XNX|1|S2|G|789
7XNX|1|S2|C|790
7XNX|1|S2|C|791
7XNX|1|S2|C|792
7XNX|1|S2|G|793
7XNX|1|S2|A|794
7XNX|1|S2|A|795
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SG
- 40S ribosomal protein S6
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
Coloring options: