HL_7XNX_103

3D structure

PDB id

7XNX (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCGAGCCG

Length

8 nucleotides

Bulged bases

7XNX|1|S2|G|836, 7XNX|1|S2|G|838, 7XNX|1|S2|C|840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XNX|1|S2|C|834
7XNX|1|S2|C|835
7XNX|1|S2|G|836
7XNX|1|S2|A|837
7XNX|1|S2|G|838
7XNX|1|S2|C|839
7XNX|1|S2|C|840
7XNX|1|S2|G|841

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SY

40S ribosomal protein S24