HL_7Y41_028

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

7Y41|1|A|C|1002

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y41_028 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5616

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Y41|1|A|C|1001
7Y41|1|A|C|1002
7Y41|1|A|A|1003
7Y41|1|A|C|1004
7Y41|1|A|A|1005
7Y41|1|A|G|1006

Current chains

Chain A

23S ribosomal RNA

Nearby chains