HL_7Y7C_043

3D structure

PDB id

7Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7Y7C|1|a|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7C_043 not in the Motif Atlas

Homologous match to HL_5J7L_139

Geometric discrepancy: 0.0805

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7Y7C|1|a|G|194
7Y7C|1|a|A|195
7Y7C|1|a|A|196
7Y7C|1|a|A|197
7Y7C|1|a|C|198
7Y7C|1|a|A|199
7Y7C|1|a|U|200
7Y7C|1|a|C|201

Current chains

Chain a

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L15

Chain w

50S ribosomal protein L28