HL_7Y7E_012

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7Y7E|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1622

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7Y7E|1|A|G|462
7Y7E|1|A|U|463
7Y7E|1|A|U|464
7Y7E|1|A|A|465
7Y7E|1|A|A|466
7Y7E|1|A|U|467
7Y7E|1|A|A|468
7Y7E|1|A|C|469
7Y7E|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains