HL_7Y7E_050

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7Y7E|1|a|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_050 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.0716

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7Y7E|1|a|G|410
7Y7E|1|a|G|411
7Y7E|1|a|A|412
7Y7E|1|a|C|413
7Y7E|1|a|C|414
7Y7E|1|a|A|415
7Y7E|1|a|U|416
7Y7E|1|a|C|417

Current chains

Chain a

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L15