HL_7Y7E_087

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7Y7E|1|a|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_087 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0967

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Y7E|1|a|C|2248
7Y7E|1|a|U|2249
7Y7E|1|a|G|2250
7Y7E|1|a|OMG|2251
7Y7E|1|a|G|2252
7Y7E|1|a|G|2253
7Y7E|1|a|C|2254
7Y7E|1|a|G|2255
7Y7E|1|a|G|2256

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain l

50S ribosomal protein L16

Chain v

50S ribosomal protein L27