HL_7Y7E_102

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

7Y7E|1|a|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_102 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0532

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7Y7E|1|a|G|2819
7Y7E|1|a|A|2820
7Y7E|1|a|A|2821
7Y7E|1|a|G|2822
7Y7E|1|a|A|2823
7Y7E|1|a|C|2824
7Y7E|1|a|G|2825
7Y7E|1|a|A|2826
7Y7E|1|a|C|2827

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain m

50S ribosomal protein L17