HL_7Y7E_103

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

AGCGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_103 not in the Motif Atlas

Homologous match to HL_7A0S_068

Geometric discrepancy: 0.0671

The information below is about HL_7A0S_068

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7Y7E|1|a|A|2856
7Y7E|1|a|G|2857
7Y7E|1|a|C|2858
7Y7E|1|a|G|2859
7Y7E|1|a|A|2860
7Y7E|1|a|U|2861

Current chains

Chain a

23S rRNA

Nearby chains

Chain o

50S ribosomal protein L19