HL_7Y7G_084

3D structure

PDB id

7Y7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

7Y7G|1|a|A|2031, 7Y7G|1|a|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7G_084 not in the Motif Atlas

Homologous match to HL_5J7L_183

Geometric discrepancy: 0.0733

The information below is about HL_5J7L_183

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

8

Unit IDs

7Y7G|1|a|G|2027
7Y7G|1|a|U|2028
7Y7G|1|a|G|2029
7Y7G|1|a|6MZ|2030
7Y7G|1|a|A|2031
7Y7G|1|a|G|2032
7Y7G|1|a|A|2033
7Y7G|1|a|U|2034
7Y7G|1|a|G|2035
7Y7G|1|a|C|2036

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain q

50S ribosomal protein L21

Chain z

50S ribosomal protein L32