HL_7Y7H_033
3D structure
- PDB id
- 7Y7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- G(5MU)(PSU)CG(1MA)UUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU, 1MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Y7H_033 not in the Motif Atlas
- Homologous match to HL_5L4O_003
- Geometric discrepancy: 0.1132
- The information below is about HL_5L4O_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7Y7H|1|V|G|53
7Y7H|1|V|5MU|54
7Y7H|1|V|PSU|55
7Y7H|1|V|C|56
7Y7H|1|V|G|57
7Y7H|1|V|1MA|58
7Y7H|1|V|U|59
7Y7H|1|V|U|60
7Y7H|1|V|C|61
Current chains
- Chain V
- A-site tRNA-Tyr
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 50S ribosomal protein L16
Coloring options: