HL_7YG8_004

3D structure

PDB id

7YG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Tetrahymena ribozyme conformation 5 undergoing the second-step self-splicing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CUUGCAAAG

Length

9 nucleotides

Bulged bases

7YG8|1|N|U|168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7YG8|1|N|C|166
7YG8|1|N|U|167
7YG8|1|N|U|168
7YG8|1|N|G|169
7YG8|1|N|C|170
7YG8|1|N|A|171
7YG8|1|N|A|172
7YG8|1|N|A|173
7YG8|1|N|G|174

Current chains

Chain N

RNA (387-MER)

Nearby chains