3D structure

PDB id
7YLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of 50S-HflX complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.52 Å

Loop

Sequence
CGAGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7YLA_064 not in the Motif Atlas
Homologous match to HL_7A0S_063
Geometric discrepancy: 0.0809
The information below is about HL_7A0S_063
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7YLA|1|I|C|2658
7YLA|1|I|G|2659
7YLA|1|I|A|2660
7YLA|1|I|G|2661
7YLA|1|I|A|2662
7YLA|1|I|G|2663

Current chains

Chain I
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain 6
GTPase HflX
Chain O
50S ribosomal protein L6

Coloring options:


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