HL_7Z3N_120

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAUUUUUG

Length

9 nucleotides

Bulged bases

7Z3N|1|2|U|1056, 7Z3N|1|2|U|1057, 7Z3N|1|2|U|1058

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3N_120 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.3132

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7Z3N|1|2|U|1053
7Z3N|1|2|U|1054
7Z3N|1|2|A|1055
7Z3N|1|2|U|1056
7Z3N|1|2|U|1057
7Z3N|1|2|U|1058
7Z3N|1|2|U|1059
7Z3N|1|2|U|1060
7Z3N|1|2|G|1061

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S1

Chain Sb

Ribosomal protein s27-like protein