HL_7ZAI_008

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|C|329
7ZAI|1|2|A|330
7ZAI|1|2|C|331
7ZAI|1|2|U|332
7ZAI|1|2|G|333
7ZAI|1|2|A|334
7ZAI|1|2|G|335
7ZAI|1|2|A|336
7ZAI|1|2|C|337
7ZAI|1|2|A|338
7ZAI|1|2|C|339
7ZAI|1|2|G|340
7ZAI|1|2|G|341
7ZAI|1|2|G|342

Current chains

Chain 2

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S4e

Chain G

30S ribosomal protein S6e

Chain J

30S ribosomal protein S8e