HL_7ZAI_021

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAU(B8H)CAACGC

Length

10 nucleotides

Bulged bases

7ZAI|1|2|G|943

QA status

Modified nucleotides: B8H

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|G|935
7ZAI|1|2|A|936
7ZAI|1|2|U|937
7ZAI|1|2|B8H|938
7ZAI|1|2|C|939
7ZAI|1|2|A|940
7ZAI|1|2|A|941
7ZAI|1|2|C|942
7ZAI|1|2|G|943
7ZAI|1|2|C|944

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain K

30S ribosomal protein S9

Chain L

30S ribosomal protein S10

Chain P

30S ribosomal protein S14 type Z

Chain T

30S ribosomal protein S19