HL_7ZJX_002

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCAGCCCCAC

Length

13 nucleotides

Bulged bases

7ZJX|1|I|C|142, 7ZJX|1|I|C|145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|I|G|138
7ZJX|1|I|U|139
7ZJX|1|I|G|140
7ZJX|1|I|G|141
7ZJX|1|I|C|142
7ZJX|1|I|A|143
7ZJX|1|I|G|144
7ZJX|1|I|C|145
7ZJX|1|I|C|146
7ZJX|1|I|C|147
7ZJX|1|I|C|148
7ZJX|1|I|A|149
7ZJX|1|I|C|150

Current chains

Chain I

CrPV IRES

Nearby chains

Chain SQ

Ribosomal protein S5

Chain Sk

40S ribosomal protein S25