HL_7ZJX_015

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGACGCCUCGCCGGCGGGCGCGACCCCUC

Length

30 nucleotides

Bulged bases

7ZJX|1|L5|C|791, 7ZJX|1|L5|C|797

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|G|754
7ZJX|1|L5|G|755
7ZJX|1|L5|G|756
7ZJX|1|L5|A|757
7ZJX|1|L5|C|758
7ZJX|1|L5|G|759
7ZJX|1|L5|C|760
7ZJX|1|L5|C|761
7ZJX|1|L5|U|762
7ZJX|1|L5|C|763
7ZJX|1|L5|G|764
7ZJX|1|L5|C|765
7ZJX|1|L5|C|784
7ZJX|1|L5|G|785
7ZJX|1|L5|G|786
7ZJX|1|L5|C|787
7ZJX|1|L5|G|788
7ZJX|1|L5|G|789
7ZJX|1|L5|G|790
7ZJX|1|L5|C|791
7ZJX|1|L5|G|792
7ZJX|1|L5|C|793
7ZJX|1|L5|G|794
7ZJX|1|L5|A|795
7ZJX|1|L5|C|796
7ZJX|1|L5|C|797
7ZJX|1|L5|C|798
7ZJX|1|L5|C|799
7ZJX|1|L5|U|800
7ZJX|1|L5|C|801

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L9