3D structure

PDB id
7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S ribosome programmed with SECIS and SBP2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGCGUCGCGCGCCGGCGCGCGCGCG
Length
25 nucleotides
Bulged bases
7ZJX|1|L5|U|1132
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZJX|1|L5|C|1128
7ZJX|1|L5|G|1129
7ZJX|1|L5|C|1130
7ZJX|1|L5|G|1131
7ZJX|1|L5|U|1132
7ZJX|1|L5|C|1133
7ZJX|1|L5|G|1134
7ZJX|1|L5|C|1135
7ZJX|1|L5|G|1136
7ZJX|1|L5|C|1137
7ZJX|1|L5|G|1138
7ZJX|1|L5|C|1139
7ZJX|1|L5|C|1140
7ZJX|1|L5|G|1200
7ZJX|1|L5|G|1201
7ZJX|1|L5|C|1202
7ZJX|1|L5|G|1203
7ZJX|1|L5|C|1204
7ZJX|1|L5|G|1205
7ZJX|1|L5|C|1206
7ZJX|1|L5|G|1207
7ZJX|1|L5|C|1208
7ZJX|1|L5|G|1209
7ZJX|1|L5|C|1210
7ZJX|1|L5|G|1211

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LH
60S ribosomal protein L6
Chain Le
60S ribosomal protein L29

Coloring options:

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