HL_7ZJX_044

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZJX_044 not in the Motif Atlas

Geometric match to HL_4V9F_060

Geometric discrepancy: 0.1598

The information below is about HL_4V9F_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7ZJX|1|L5|C|2404
7ZJX|1|L5|G|2405
7ZJX|1|L5|C|2406
7ZJX|1|L5|G|2407
7ZJX|1|L5|A|2408
7ZJX|1|L5|G|2409

Current chains

Chain L5

28S rRNA

Nearby chains