HL_7ZJX_087

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGCCGGUACAG

Length

12 nucleotides

Bulged bases

7ZJX|1|S2|C|73, 7ZJX|1|S2|U|76

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|C|69
7ZJX|1|S2|G|70
7ZJX|1|S2|G|71
7ZJX|1|S2|C|72
7ZJX|1|S2|C|73
7ZJX|1|S2|G|74
7ZJX|1|S2|G|75
7ZJX|1|S2|U|76
7ZJX|1|S2|A|77
7ZJX|1|S2|C|78
7ZJX|1|S2|A|79
7ZJX|1|S2|G|80

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LZ

Ribosomal protein L24

Chain SR

40S ribosomal protein S6