HL_7ZJX_089

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCGCUGACCCCCUUCGCGGGGGGGA(PSU)GCGU

Length

30 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|G|185
7ZJX|1|S2|C|186
7ZJX|1|S2|G|187
7ZJX|1|S2|C|188
7ZJX|1|S2|U|189
7ZJX|1|S2|G|190
7ZJX|1|S2|A|191
7ZJX|1|S2|C|192
7ZJX|1|S2|C|193
7ZJX|1|S2|C|194
7ZJX|1|S2|C|195
7ZJX|1|S2|C|196
7ZJX|1|S2|U|197
7ZJX|1|S2|U|198
7ZJX|1|S2|C|199
7ZJX|1|S2|G|200
7ZJX|1|S2|C|201
7ZJX|1|S2|G|202
7ZJX|1|S2|G|203
7ZJX|1|S2|G|204
7ZJX|1|S2|G|205
7ZJX|1|S2|G|206
7ZJX|1|S2|G|207
7ZJX|1|S2|G|208
7ZJX|1|S2|A|209
7ZJX|1|S2|PSU|210
7ZJX|1|S2|G|211
7ZJX|1|S2|C|212
7ZJX|1|S2|G|213
7ZJX|1|S2|U|214

Current chains

Chain S2

18S rRNA

Nearby chains

Chain ST

40S ribosomal protein S8