HL_7ZJX_101

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGGCGGCCGCCCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|C|696
7ZJX|1|S2|G|697
7ZJX|1|S2|G|698
7ZJX|1|S2|G|699
7ZJX|1|S2|C|700
7ZJX|1|S2|G|701
7ZJX|1|S2|G|702
7ZJX|1|S2|C|726
7ZJX|1|S2|C|727
7ZJX|1|S2|G|728
7ZJX|1|S2|C|729
7ZJX|1|S2|C|730
7ZJX|1|S2|C|731
7ZJX|1|S2|G|732

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S7

Chain SU

40S ribosomal protein S9

Chain Sh

40S ribosomal protein S15a