HL_7ZJX_113

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUUGAUAGCUC

Length

12 nucleotides

Bulged bases

7ZJX|1|S2|U|1301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|G|1295
7ZJX|1|S2|A|1296
7ZJX|1|S2|U|1297
7ZJX|1|S2|U|1298
7ZJX|1|S2|G|1299
7ZJX|1|S2|A|1300
7ZJX|1|S2|U|1301
7ZJX|1|S2|A|1302
7ZJX|1|S2|G|1303
7ZJX|1|S2|C|1304
7ZJX|1|S2|U|1305
7ZJX|1|S2|C|1306

Current chains

Chain S2

18S rRNA

Nearby chains

Chain B

Selenocysteine insertion sequence-binding protein 2

Chain S

Selenocysteine insertion sequence 1; SECIS_1

Chain SD

Ubiquitin carboxyl extension protein 80

Chain SH

40S ribosomal protein S29

Chain Sa

40S ribosomal protein S15