HL_7ZOD_031

3D structure

PDB id

7ZOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

AGCGUAAUAGCU

Length

12 nucleotides

Bulged bases

7ZOD|1|b|A|1095, 7ZOD|1|b|A|1098

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZOD|1|b|A|1090
7ZOD|1|b|G|1091
7ZOD|1|b|C|1092
7ZOD|1|b|G|1093
7ZOD|1|b|U|1094
7ZOD|1|b|A|1095
7ZOD|1|b|A|1096
7ZOD|1|b|U|1097
7ZOD|1|b|A|1098
7ZOD|1|b|G|1099
7ZOD|1|b|C|1100
7ZOD|1|b|U|1101

Current chains

Chain b

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain g

50S ribosomal protein L6