HL_7ZPI_001

3D structure

PDB id

7ZPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian Dicer in the "dicing state" with pre-miR-15a substrate

Experimental method

ELECTRON MICROSCOPY

Resolution

5.91 Å

Loop

Sequence

GGAUGUUGGGU

Length

11 nucleotides

Bulged bases

7ZPI|1|B|U|25, 7ZPI|1|B|U|27, 7ZPI|1|B|U|28

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPI|1|B|G|22
7ZPI|1|B|G|23
7ZPI|1|B|A|24
7ZPI|1|B|U|25
7ZPI|1|B|G|26
7ZPI|1|B|U|27
7ZPI|1|B|U|28
7ZPI|1|B|G|29
7ZPI|1|B|G|34
7ZPI|1|B|G|35
7ZPI|1|B|U|36

Current chains

Chain B

59-nt precursor of miR-15a

Nearby chains

Chain A

Endoribonuclease Dicer